residuals
Usage
# S4 method for class 'FLQuant'
residuals(object, fit, type = "log", ...)Examples
data(ple4)
fit <- rlnorm(1, log(catch(ple4)), 0.1)
residuals(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964
#> all 0.07248 -0.01779 -0.09516 -0.09566 -0.06742 -0.04194 0.04796 0.09911
#> year
#> age 1965 1966 1967 1968 1969 1970 1971 1972
#> all -0.16259 -0.00320 -0.06375 0.06731 0.13888 0.07722 0.04199 -0.02892
#> year
#> age 1973 1974 1975 1976 1977 1978 1979 1980
#> all 0.12092 0.07705 -0.04056 0.02195 -0.08831 -0.02992 0.02317 0.08379
#> year
#> age 1981 1982 1983 1984 1985 1986 1987 1988
#> all -0.01328 0.01242 -0.04609 0.08292 -0.01476 -0.11751 0.11581 0.00101
#> year
#> age 1989 1990 1991 1992 1993 1994 1995 1996
#> all 0.04949 -0.09089 0.07807 0.01655 0.09007 0.00850 -0.14278 0.01872
#> year
#> age 1997 1998 1999 2000 2001 2002 2003 2004
#> all -0.03532 0.07023 -0.14311 0.07309 -0.09676 -0.08863 -0.01858 0.01900
#> year
#> age 2005 2006 2007 2008 2009 2010 2011 2012
#> all 0.02258 -0.04830 -0.10978 -0.15860 0.05156 0.02159 0.00635 0.10636
#> year
#> age 2013 2014 2015 2016 2017
#> all -0.13064 -0.11370 -0.11003 -0.02336 -0.01538
#>
#> units: t
residuals(catch(ple4), fit, type="student")
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963
#> all 0.375223 0.298250 0.176122 0.105450 0.109151 0.085518 0.050375
#> year
#> age 1964 1965 1966 1967 1968 1969 1970
#> all 0.035582 -0.014787 0.000163 -0.001709 0.023011 0.047749 0.075860
#> year
#> age 1971 1972 1973 1974 1975 1976 1977
#> all 0.047327 0.008865 0.024831 0.004175 0.005395 0.017940 0.011007
#> year
#> age 1978 1979 1980 1981 1982 1983 1984
#> all 0.044491 0.009305 0.023227 0.072423 0.113089 0.440252 0.487595
#> year
#> age 1985 1986 1987 1988 1989 1990 1991
#> all 1.242763 3.299113 3.369902 4.883378 2.915622 1.661964 0.328345
#> year
#> age 1992 1993 1994 1995 1996 1997 1998
#> all 0.111967 0.004981 0.011000 0.021569 0.081105 0.003516 -0.002685
#> year
#> age 1999 2000 2001 2002 2003 2004 2005
#> all 0.039450 0.036463 0.056502 0.007481 0.003274 0.046005 0.172127
#> year
#> age 2006 2007 2008 2009 2010 2011 2012
#> all 0.158618 0.172001 0.101507 0.176660 0.148032 0.137390 0.107306
#> year
#> age 2013 2014 2015 2016 2017
#> all 0.002043 0.010089 0.017886 0.069489 0.102082
#>
#> units:
rraw(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964 1965 1966
#> all 5479 -1593 -10501 -11843 -8337 -5410 6594 13921 -26732 -521
#> year
#> age 1967 1968 1969 1970 1971 1972 1973 1974 1975 1976
#> all -10168 9752 18954 10153 5807 -4383 17257 11717 -6847 3819
#> year
#> age 1977 1978 1979 1980 1981 1982 1983 1984 1985 1986
#> all -15312 -5411 3954 14845 -2467 2376 -10029 18164 -3673 -34818
#> year
#> age 1987 1988 1989 1990 1991 1992 1993 1994 1995 1996
#> all 33735 319 14102 -23844 16386 3163 15467 1280 -20356 2443
#> year
#> age 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006
#> all -5471 11614 -26257 10291 -13015 -13328 -2889 2635 2558 -5535
#> year
#> age 2007 2008 2009 2010 2011 2012 2013 2014 2015 2016
#> all -12156 -19489 5815 2538 757 13305 -19686 -16829 -15975 -3102
#> year
#> age 2017
#> all -1936
#>
#> units: t
rlogstandard(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964 1965
#> all 0.9237 -0.2267 -1.2127 -1.2192 -0.8592 -0.5345 0.6112 1.2631 -2.0721
#> year
#> age 1966 1967 1968 1969 1970 1971 1972 1973 1974
#> all -0.0408 -0.8124 0.8578 1.7699 0.9841 0.5351 -0.3686 1.5411 0.9820
#> year
#> age 1975 1976 1977 1978 1979 1980 1981 1982 1983
#> all -0.5169 0.2798 -1.1255 -0.3813 0.2953 1.0678 -0.1693 0.1583 -0.5874
#> year
#> age 1984 1985 1986 1987 1988 1989 1990 1991 1992
#> all 1.0567 -0.1881 -1.4976 1.4760 0.0129 0.6308 -1.1583 0.9950 0.2109
#> year
#> age 1993 1994 1995 1996 1997 1998 1999 2000 2001
#> all 1.1479 0.1083 -1.8197 0.2386 -0.4501 0.8951 -1.8238 0.9315 -1.2331
#> year
#> age 2002 2003 2004 2005 2006 2007 2008 2009 2010
#> all -1.1296 -0.2368 0.2421 0.2878 -0.6155 -1.3990 -2.0212 0.6571 0.2752
#> year
#> age 2011 2012 2013 2014 2015 2016 2017
#> all 0.0809 1.3554 -1.6649 -1.4491 -1.4023 -0.2978 -0.1960
#>
#> units:
rstandard(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964 1965 1966 1967 1968 1969 1970
#> all 13.9 12.7 11.7 11.7 12.1 12.4 13.5 14.2 11.0 12.9 12.1 13.8 14.8 13.9
#> year
#> age 1971 1972 1973 1974 1975 1976 1977 1978 1979 1980 1981 1982 1983 1984
#> all 13.5 12.5 14.6 13.9 12.4 13.2 11.8 12.5 13.2 14.0 12.7 13.1 12.3 14.0
#> year
#> age 1985 1986 1987 1988 1989 1990 1991 1992 1993 1994 1995 1996 1997 1998
#> all 12.7 11.5 14.5 12.9 13.6 11.8 14.0 13.1 14.1 13.0 11.2 13.1 12.5 13.8
#> year
#> age 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012
#> all 11.2 13.9 11.7 11.8 12.7 13.2 13.2 12.3 11.6 11.0 13.6 13.2 13.0 14.4
#> year
#> age 2013 2014 2015 2016 2017
#> all 11.3 11.5 11.6 12.6 12.7
#>
#> units:
rstudent(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963
#> all 0.375223 0.298250 0.176122 0.105450 0.109151 0.085518 0.050375
#> year
#> age 1964 1965 1966 1967 1968 1969 1970
#> all 0.035582 -0.014787 0.000163 -0.001709 0.023011 0.047749 0.075860
#> year
#> age 1971 1972 1973 1974 1975 1976 1977
#> all 0.047327 0.008865 0.024831 0.004175 0.005395 0.017940 0.011007
#> year
#> age 1978 1979 1980 1981 1982 1983 1984
#> all 0.044491 0.009305 0.023227 0.072423 0.113089 0.440252 0.487595
#> year
#> age 1985 1986 1987 1988 1989 1990 1991
#> all 1.242763 3.299113 3.369902 4.883378 2.915622 1.661964 0.328345
#> year
#> age 1992 1993 1994 1995 1996 1997 1998
#> all 0.111967 0.004981 0.011000 0.021569 0.081105 0.003516 -0.002685
#> year
#> age 1999 2000 2001 2002 2003 2004 2005
#> all 0.039450 0.036463 0.056502 0.007481 0.003274 0.046005 0.172127
#> year
#> age 2006 2007 2008 2009 2010 2011 2012
#> all 0.158618 0.172001 0.101507 0.176660 0.148032 0.137390 0.107306
#> year
#> age 2013 2014 2015 2016 2017
#> all 0.002043 0.010089 0.017886 0.069489 0.102082
#>
#> units: