residuals
Usage
# S4 method for class 'FLQuant'
residuals(object, fit, type = "log", ...)Examples
data(ple4)
fit <- rlnorm(1, log(catch(ple4)), 0.1)
residuals(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964
#> all 0.13888 0.07722 0.04199 -0.02892 0.12092 0.07705 -0.04056 0.02195
#> year
#> age 1965 1966 1967 1968 1969 1970 1971 1972
#> all -0.08831 -0.02992 0.02317 0.08379 -0.01328 0.01242 -0.04609 0.08292
#> year
#> age 1973 1974 1975 1976 1977 1978 1979 1980
#> all -0.01476 -0.11751 0.11581 0.00101 0.04949 -0.09089 0.07807 0.01655
#> year
#> age 1981 1982 1983 1984 1985 1986 1987 1988
#> all 0.09007 0.00850 -0.14278 0.01872 -0.03532 0.07023 -0.14311 0.07309
#> year
#> age 1989 1990 1991 1992 1993 1994 1995 1996
#> all -0.09676 -0.08863 -0.01858 0.01900 0.02258 -0.04830 -0.10978 -0.15860
#> year
#> age 1997 1998 1999 2000 2001 2002 2003 2004
#> all 0.05156 0.02159 0.00635 0.10636 -0.13064 -0.11370 -0.11003 -0.02336
#> year
#> age 2005 2006 2007 2008 2009 2010 2011 2012
#> all -0.01538 0.07131 0.00378 0.07201 -0.11273 -0.04081 0.13259 0.10014
#> year
#> age 2013 2014 2015 2016 2017
#> all 0.05269 0.02920 -0.03639 -0.03848 0.10363
#>
#> units: t
residuals(catch(ple4), fit, type="student")
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963
#> all 0.345793 0.290968 0.203547 0.116256 0.157129 0.111371 0.024123
#> year
#> age 1964 1965 1966 1967 1968 1969 1970
#> all 0.019223 -0.002899 0.000853 0.005854 0.022176 0.016450 0.050369
#> year
#> age 1971 1972 1973 1974 1975 1976 1977
#> all 0.021739 0.023260 0.006291 -0.003742 -0.006591 0.021542 -0.001959
#> year
#> age 1978 1979 1980 1981 1982 1983 1984
#> all 0.059971 -0.002467 0.050858 0.017347 0.102211 0.530288 0.552041
#> year
#> age 1985 1986 1987 1988 1989 1990 1991
#> all 1.154902 1.872941 5.082902 3.672057 3.522845 1.450639 0.436406
#> year
#> age 1992 1993 1994 1995 1996 1997 1998
#> all 0.096962 0.027026 0.002443 0.029208 0.016122 0.012600 0.006107
#> year
#> age 1999 2000 2001 2002 2003 2004 2005
#> all 0.007731 0.037238 0.037626 0.000864 -0.005905 0.030318 0.137412
#> year
#> age 2006 2007 2008 2009 2010 2011 2012
#> all 0.180046 0.192477 0.172617 0.096048 0.108103 0.159696 0.092193
#> year
#> age 2013 2014 2015 2016 2017
#> all 0.044143 0.043462 0.035386 0.056120 0.125552
#>
#> units:
rraw(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964 1965 1966
#> all 10161 6598 4325 -3462 13616 9366 -5829 3204 -13979 -4928
#> year
#> age 1967 1968 1969 1970 1971 1972 1973 1974 1975 1976
#> all 3538 12042 -1955 1687 -6661 11887 -2252 -19701 18087 178
#> year
#> age 1977 1978 1979 1980 1981 1982 1983 1984 1985 1986
#> all 8008 -16952 12967 3032 15891 1629 -32635 4234 -8882 18938
#> year
#> age 1987 1988 1989 1990 1991 1992 1993 1994 1995 1996
#> all -47461 22220 -29669 -23226 -4092 3626 4010 -7484 -15389 -22638
#> year
#> age 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006
#> all 7649 3658 1080 14731 -17879 -17317 -17916 -3311 -1776 7700
#> year
#> age 2007 2008 2009 2010 2011 2012 2013 2014 2015 2016
#> all 395 7879 -13806 -4950 14867 12565 7240 4022 -5090 -5147
#> year
#> age 2017
#> all 12298
#>
#> units: t
rlogstandard(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964 1965
#> all 1.7775 0.9883 0.5374 -0.3701 1.5477 0.9862 -0.5192 0.2810 -1.1303
#> year
#> age 1966 1967 1968 1969 1970 1971 1972 1973 1974
#> all -0.3829 0.2965 1.0724 -0.1700 0.1590 -0.5899 1.0612 -0.1889 -1.5040
#> year
#> age 1975 1976 1977 1978 1979 1980 1981 1982 1983
#> all 1.4823 0.0130 0.6335 -1.1633 0.9992 0.2118 1.1528 0.1088 -1.8275
#> year
#> age 1984 1985 1986 1987 1988 1989 1990 1991 1992
#> all 0.2396 -0.4520 0.8989 -1.8316 0.9355 -1.2384 -1.1344 -0.2378 0.2431
#> year
#> age 1993 1994 1995 1996 1997 1998 1999 2000 2001
#> all 0.2890 -0.6181 -1.4050 -2.0299 0.6600 0.2764 0.0812 1.3613 -1.6721
#> year
#> age 2002 2003 2004 2005 2006 2007 2008 2009 2010
#> all -1.4553 -1.4083 -0.2990 -0.1969 0.9127 0.0484 0.9216 -1.4428 -0.5224
#> year
#> age 2011 2012 2013 2014 2015 2016 2017
#> all 1.6971 1.2816 0.6744 0.3737 -0.4658 -0.4925 1.3264
#>
#> units:
rstandard(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963 1964 1965 1966 1967 1968 1969 1970
#> all 14.8 13.9 13.4 12.5 14.5 13.9 12.4 13.2 11.8 12.5 13.2 14.0 12.7 13.0
#> year
#> age 1971 1972 1973 1974 1975 1976 1977 1978 1979 1980 1981 1982 1983 1984
#> all 12.3 14.0 12.7 11.4 14.5 12.9 13.5 11.8 13.9 13.1 14.1 13.0 11.2 13.1
#> year
#> age 1985 1986 1987 1988 1989 1990 1991 1992 1993 1994 1995 1996 1997 1998
#> all 12.4 13.8 11.2 13.8 11.7 11.8 12.6 13.1 13.2 12.3 11.5 11.0 13.6 13.2
#> year
#> age 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012
#> all 13.0 14.3 11.3 11.5 11.5 12.6 12.7 13.8 12.9 13.8 11.5 12.4 14.7 14.2
#> year
#> age 2013 2014 2015 2016 2017
#> all 13.6 13.3 12.4 12.4 14.3
#>
#> units:
rstudent(catch(ple4), fit)
#> An object of class "FLQuant"
#> , , unit = unique, season = all, area = unique
#>
#> year
#> age 1957 1958 1959 1960 1961 1962 1963
#> all 0.345793 0.290968 0.203547 0.116256 0.157129 0.111371 0.024123
#> year
#> age 1964 1965 1966 1967 1968 1969 1970
#> all 0.019223 -0.002899 0.000853 0.005854 0.022176 0.016450 0.050369
#> year
#> age 1971 1972 1973 1974 1975 1976 1977
#> all 0.021739 0.023260 0.006291 -0.003742 -0.006591 0.021542 -0.001959
#> year
#> age 1978 1979 1980 1981 1982 1983 1984
#> all 0.059971 -0.002467 0.050858 0.017347 0.102211 0.530288 0.552041
#> year
#> age 1985 1986 1987 1988 1989 1990 1991
#> all 1.154902 1.872941 5.082902 3.672057 3.522845 1.450639 0.436406
#> year
#> age 1992 1993 1994 1995 1996 1997 1998
#> all 0.096962 0.027026 0.002443 0.029208 0.016122 0.012600 0.006107
#> year
#> age 1999 2000 2001 2002 2003 2004 2005
#> all 0.007731 0.037238 0.037626 0.000864 -0.005905 0.030318 0.137412
#> year
#> age 2006 2007 2008 2009 2010 2011 2012
#> all 0.180046 0.192477 0.172617 0.096048 0.108103 0.159696 0.092193
#> year
#> age 2013 2014 2015 2016 2017
#> all 0.044143 0.043462 0.035386 0.056120 0.125552
#>
#> units: